Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-483-3p in SMCL Lung Bhattacharjee Cluster 52 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 52. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-483-3p 5817 PVR poliovirus receptor [Source:HGNC Symbol;Acc:9705] zzz999 9551 ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 [Source:HGNC Symbol;Acc:848] zzz999 4957 ODF2 outer dense fiber of sperm tails 2 [Source:HGNC Symbol;Acc:8114] P 84733 CBX2 chromobox homolog 2 [Source:HGNC Symbol;Acc:1552] T 1353 COX11 COX11 cytochrome c oxidase assembly homolog (yeast) [Source:HGNC Symbol;Acc:2261] zzz999 3621 ING1 inhibitor of growth family, member 1 [Source:HGNC Symbol;Acc:6062] P T 8270 LAGE3 L antigen family, member 3 [Source:HGNC Symbol;Acc:26058] zzz999 5794 PTPRH protein tyrosine phosphatase, receptor type, H [Source:HGNC Symbol;Acc:9672] zzz999 25822 DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:HGNC Symbol;Acc:14887] T 5991 RFX3 regulatory factor X, 3 (influences HLA class II expression) [Source:HGNC Symbol;Acc:9984] zzz999 55643 BTBD2 BTB (POZ) domain containing 2 [Source:HGNC Symbol;Acc:15504] zzz999 2108 ETFA electron-transfer-flavoprotein, alpha polypeptide [Source:HGNC Symbol;Acc:3481] zzz999 10330 CNPY2 canopy 2 homolog (zebrafish) [Source:HGNC Symbol;Acc:13529] zzz999 11315 PARK7 Parkinson disease (autosomal recessive, early onset) 7 [Source:HGNC Symbol;Acc:16369] zzz999 2901 GRIK5 glutamate receptor, ionotropic, kainate 5 [Source:HGNC Symbol;Acc:4583] zzz999 92211 CDHR1 cadherin-related family member 1 [Source:HGNC Symbol;Acc:14550] zzz999 611 OPN1SW opsin 1 (cone pigments), short-wave-sensitive [Source:HGNC Symbol;Acc:1012] zzz999 51634 RBMX2 RNA binding motif protein, X-linked 2 [Source:HGNC Symbol;Acc:24282] zzz999 5707 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:HGNC Symbol;Acc:9554] zzz999 1294 COL7A1 collagen, type VII, alpha 1 [Source:HGNC Symbol;Acc:2214] zzz999 3607 FOXK2 forkhead box K2 [Source:HGNC Symbol;Acc:6036] zzz999 993 CDC25A cell division cycle 25 homolog A (S. pombe) [Source:HGNC Symbol;Acc:1725] T 27237 ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16 [Source:HGNC Symbol;Acc:15515] T 22822 PHLDA1 pleckstrin homology-like domain, family A, member 1 [Source:HGNC Symbol;Acc:8933] zzz999 5605 MAP2K2 mitogen-activated protein kinase kinase 2 [Source:HGNC Symbol;Acc:6842] zzz999 1137 CHRNA4 cholinergic receptor, nicotinic, alpha 4 [Source:HGNC Symbol;Acc:1958] T 2889 RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:4568] P T 8398 PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent) [Source:HGNC Symbol;Acc:9039] T 5566 PRKACA protein kinase, cAMP-dependent, catalytic, alpha [Source:HGNC Symbol;Acc:9380] zzz999 3549 IHH Indian hedgehog [Source:HGNC Symbol;Acc:5956] zzz999 27258 LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17874] zzz999 3797 KIF3C kinesin family member 3C [Source:HGNC Symbol;Acc:6321] T 1181 CLCN2 chloride channel 2 [Source:HGNC Symbol;Acc:2020] zzz999 81542 TMX1 thioredoxin-related transmembrane protein 1 [Source:HGNC Symbol;Acc:15487] T 4057 LTF lactotransferrin [Source:HGNC Symbol;Acc:6720] zzz999 10058 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:HGNC Symbol;Acc:47] zzz999 7850 IL1R2 interleukin 1 receptor, type II [Source:HGNC Symbol;Acc:5994] zzz999 10382 TUBB4 tubulin, beta 4 [Source:HGNC Symbol;Acc:20774] zzz999 1959 EGR2 early growth response 2 [Source:HGNC Symbol;Acc:3239] zzz999 25977 NECAP1 NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:24539] T 552900 BOLA2 bolA homolog 2 (E. coli) [Source:HGNC Symbol;Acc:29488] zzz999 4976 OPA1 optic atrophy 1 (autosomal dominant) [Source:HGNC Symbol;Acc:8140] T 4642 MYO1D myosin ID [Source:HGNC Symbol;Acc:7598] zzz999 2520 GAST gastrin [Source:HGNC Symbol;Acc:4164] zzz999 6173 RPL36A ribosomal protein L36a [Source:HGNC Symbol;Acc:10359] zzz999 6535 SLC6A8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 [Source:HGNC Symbol;Acc:11055] P T 7633 ZNF79 zinc finger protein 79 [Source:HGNC Symbol;Acc:13153] zzz999 8828 NRP2 neuropilin 2 [Source:HGNC Symbol;Acc:8005] zzz999 5283 PIGH phosphatidylinositol glycan anchor biosynthesis, class H [Source:HGNC Symbol;Acc:8964] zzz999 2597 GAPDH glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141] zzz999 3845 KRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:HGNC Symbol;Acc:6407] zzz999 3975 LHX1 LIM homeobox 1 [Source:HGNC Symbol;Acc:6593] zzz999 25999 CLIP3 CAP-GLY domain containing linker protein 3 [Source:HGNC Symbol;Acc:24314] zzz999 4986 OPRK1 opioid receptor, kappa 1 [Source:HGNC Symbol;Acc:8154] T 8913 CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:HGNC Symbol;Acc:1394] zzz999 22846 VASH1 vasohibin 1 [Source:HGNC Symbol;Acc:19964] T 23468 CBX5 chromobox homolog 5 [Source:HGNC Symbol;Acc:1555] zzz999 63941 NECAB3 N-terminal EF-hand calcium binding protein 3 [Source:HGNC Symbol;Acc:15851] zzz999 10675 CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:HGNC Symbol;Acc:2467] zzz999 5582 PRKCG protein kinase C, gamma [Source:HGNC Symbol;Acc:9402] zzz999 2161 F12 coagulation factor XII (Hageman factor) [Source:HGNC Symbol;Acc:3530] zzz999 8872 CDC123 cell division cycle 123 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16827] zzz999 23308 ICOSLG inducible T-cell co-stimulator ligand [Source:HGNC Symbol;Acc:17087] T 2918 GRM8 glutamate receptor, metabotropic 8 [Source:HGNC Symbol;Acc:4600] T 708 C1QBP complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243] zzz999 5778 PTPN7 protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:9659] T 6929 TCF3 transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) [Source:HGNC Symbol;Acc:11633] T 4884 NPTX1 neuronal pentraxin I [Source:HGNC Symbol;Acc:7952] zzz999 8535 CBX4 chromobox homolog 4 [Source:HGNC Symbol;Acc:1554] zzz999 6602 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:11106] P T 26229 B3GAT3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:HGNC Symbol;Acc:923] zzz999 10667 FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:21062] zzz999 4920 ROR2 receptor tyrosine kinase-like orphan receptor 2 [Source:HGNC Symbol;Acc:10257] T

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